The detailed information of tRNA gene sequence


Sequence ID>WENV170695666
Genome IDLGVE01149031
Search identical group
Phylum/Class[LGVE] marine sediment metagenome; combined push core samples #3730, #5133, and #5579 collected at Hydrate Ridge
Species
Start position on genome 2906
End posion on genome 2980
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
taagaataat
tRNA gene sequence 
GGGCGATTAACTCAGTGGGAGAGTGCTACCTTCACACGGTAGAAGTCACTGGTTCAAATC
CAGTATCGCCTACCA
Downstream region at tRNA end position 
gctctgagaa
Secondary structure (Cloverleaf model)
>WENV170695666	Val	CAC
                   t      ACCA gctctgagaa
                     G + T
                     G - C
                     G - C
                     C - G
                     G - C
                     A - T
                     T - A          T A
                    T     T G A C C     A
        G A        A      | | | | |     A
      T     C T C A       A C T G G     C
      G     | | | |                 T T
      G     G A G T
        G A        G     AAGTC
                    C - G
                    T - A
                    A - T
                    C - G
                    C - G
                  T       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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