The detailed information of tRNA gene sequence


Sequence ID>WENV170695683
Genome IDLGVE01153382
Search identical group
Phylum/Class[LGVE] marine sediment metagenome; combined push core samples #3730, #5133, and #5579 collected at Hydrate Ridge
Species
Start position on genome 484
End posion on genome 408
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
accattatat
tRNA gene sequence 
GGATCTATAGCTCAGTTGGTTAGAGCACTCGGCTCATAACCGAGTGGTCGCTGGTTCAAC
TCCAGCTAGATCCACCA
Downstream region at tRNA end position 
tttatttcaa
Secondary structure (Cloverleaf model)
>WENV170695683	Met	CAT
                   t      ACCA tttatttcaa
                     G - C
                     G - C
                     A - T
                     T - A
                     C - G
                     T - A
                     A - T          T C
                    T     C G A C C     A
      T G A        A      | | | | |     A
    T       C T C G       G C T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     TGGTC
                    C - G
                    T - A
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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