The detailed information of tRNA gene sequence


Sequence ID>WENV170695739
Genome IDLGVE01164961
Search identical group
Phylum/Class[LGVE] marine sediment metagenome; combined push core samples #3730, #5133, and #5579 collected at Hydrate Ridge
Species
Start position on genome 19039
End posion on genome 19127
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
tttccaatta
tRNA gene sequence 
CGAGAGGTACCGAAGTGGTCATAACGGGGCGGTCTTGAAAACCGTTAGGGAGAAATCCCA
CGTGGGTTCGAATCCCACCCTCTCGGCCA
Downstream region at tRNA end position 
taaacgcttt
Secondary structure (Cloverleaf model)
>WENV170695739	Ser	TGA
                   a      GCCA taaacgcttt
                     C - G
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
    G T G A        A      | | | | |     G
  G         A G C C       G T G G G     C
  T           | | |                 T T
  C         A C G G
    A T A          G     TAGGGAGAAATCCCAC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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