The detailed information of tRNA gene sequence


Sequence ID>WENV170695826
Genome IDLGVE01177339
Search identical group
Phylum/Class[LGVE] marine sediment metagenome; combined push core samples #3730, #5133, and #5579 collected at Hydrate Ridge
Species
Start position on genome 90
End posion on genome 14
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position
gtttttttgc
tRNA gene sequence
GGGGCTGTAGTAGAGTCGGTTACAACATCGGCCTGTCACGCCGGAGGTCGCGGGTTCGAG
TCCCGTCAGCCCCGCCA
Downstream region at tRNA end position
tttagtttcg
Secondary structure (Cloverleaf model)
>WENV170695826	Asp	GTC
                   c      GCCA tttagtttcg
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     T - A
                     G - C          T G
                    T     T G C C C     A
      T G A        A      + | | | |     G
    C       G A T G       G C G G G     C
    G       |   | |                 T T
    G       C A A C
      T T A        A     AGGTC
                    T + G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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