The detailed information of tRNA gene sequence


Sequence ID>WENV170695875
Genome IDLGVE01183873
Search identical group
Phylum/Class[LGVE] marine sediment metagenome; combined push core samples #3730, #5133, and #5579 collected at Hydrate Ridge
Species
Start position on genome 13088
End posion on genome 13012
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ttattttcat
tRNA gene sequence 
GGCGGTGTAGCTCAGATGGCTAGAGCATTCGGTTCATACCCGAAAGGTCGTGGGTTCGAC
TCCCTCCGCCGCTACCA
Downstream region at tRNA end position 
tgtatggacc
Secondary structure (Cloverleaf model)
>WENV170695875	Met	CAT
                   t      ACCA tgtatggacc
                     G + T
                     G - C
                     C - G
                     G - C
                     G - C
                     T + G
                     G - C          T C
                    T     C T C C C     A
      A G A        A      |   | | |     G
    T       C T C G       G T G G G     C
    G       | | | |                 T T
    G       G A G C
      C T A        A     AGGTC
                    T - A
                    T - A
                    C - G
                    G - C
                    G - C
                  T       C
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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