The detailed information of tRNA gene sequence


Sequence ID>WENV170695960
Genome IDLGVE01192101
Search identical group
Phylum/Class[LGVE] marine sediment metagenome; combined push core samples #3730, #5133, and #5579 collected at Hydrate Ridge
Species
Start position on genome 201
End posion on genome 289
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
ttttttttta
tRNA gene sequence 
GGAGAGGTACCGAAGTGGTCATAACGGGGCGGTCTTGAAAACCGTTAGGGTGCAAGCCCA
CGAGGGTTCGAATCCCTCCTTCTCCGCCA
Downstream region at tRNA end position 
tatttgccca
Secondary structure (Cloverleaf model)
>WENV170695960	Ser	TGA
                   a      GCCA tatttgccca
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G + T
                     G - C          T A
                    T     C T C C C     A
    G T G A        A      | | | | |     G
  G         A G C C       G A G G G     C
  T           | | |                 T T
  C         A C G G
    A T A          G     TAGGGTGCAAGCCCAC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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