The detailed information of tRNA gene sequence


Sequence ID>WENV170695970
Genome IDLGVE01193033
Search identical group
Phylum/Class[LGVE] marine sediment metagenome; combined push core samples #3730, #5133, and #5579 collected at Hydrate Ridge
Species
Start position on genome 6299
End posion on genome 6375
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
ttgatcgagt
tRNA gene sequence 
GGGGCTGTAGTAGAGTTGGTTACAACATCGGCCTGTCACGCCGGAGGTCGCGGGTTCGAG
TCCCGTCAGCCCCGCCA
Downstream region at tRNA end position 
tttgatcaca
Secondary structure (Cloverleaf model)
>WENV170695970	Asp	GTC
                   t      GCCA tttgatcaca
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     T - A
                     G - C          T G
                    T     T G C C C     A
      T G A        A      + | | | |     G
    T       G A T G       G C G G G     C
    G       |   | |                 T T
    G       C A A C
      T T A        A     AGGTC
                    T + G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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