The detailed information of tRNA gene sequence


Sequence ID>WENV170696111
Genome IDLGVE01223552
Search identical group
Phylum/Class[LGVE] marine sediment metagenome; combined push core samples #3730, #5133, and #5579 collected at Hydrate Ridge
Species
Start position on genome 540
End posion on genome 464
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
taaaggctga
tRNA gene sequence 
GGTCCTATAGCTCAGTTGGTTAGAGCACCTGACTCATAATCAGGTGGTCCCTGGTTCGAG
TCCAGGTGGGACCACGA
Downstream region at tRNA end position 
caaatacttt
Secondary structure (Cloverleaf model)
>WENV170696111	Met	CAT
                   a      ACGA caaatacttt
                     G - C
                     G - C
                     T - A
                     C - G
                     C - G
                     T + G
                     A - T          T G
                    T     G G A C C     A
      T G A        A      | | | | |     G
    T       C T C G       C C T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     TGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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