The detailed information of tRNA gene sequence


Sequence ID>WENV170696180
Genome IDLGVF01000998
Search identical group
Phylum/Class[LGVF] marine sediment metagenome; combined push core samples #3730, #5133, and #5579 collected at Hydrate Ridge
Species
Start position on genome 1173
End posion on genome 1248
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position 
gtttttatat
tRNA gene sequence 
GCCAGCGTAGCTCAGCTGGTAGAGCTACTGATTTGTAATCAGTGGGTCGGGGGTTCGAGT
CCCTCCGCTGGCTTCA
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>WENV170696180	Thr	TGT
                   t      TTCA nnnnnnnnnn
                     G - C
                     C - G
                     C - G
                     A - T
                     G - C
                     C - G
                     G - C          T G
                    T     C T C C C     A
      C G A        A      | + | | |     G
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          T     GGGTC
                    A - T
                    C - G
                    T - A
                    G - C
                    A - T
                  T       A
                  T       A
                    T G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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