The detailed information of tRNA gene sequence


Sequence ID>WENV170696184
Genome IDLGVF01001172
Search identical group
Phylum/Class[LGVF] marine sediment metagenome; combined push core samples #3730, #5133, and #5579 collected at Hydrate Ridge
Species
Start position on genome 454
End posion on genome 541
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
gtacatagaa
tRNA gene sequence 
GCCCGGGTGGTGTAGCGGCCTATCATTGAGCCCTGTCGAGGCTCGGACTCGGGTTNNTCG
GACTCGGGTTCAAATCCCGACCTGGGCGtta
Downstream region at tRNA end position 
attgaaacgg
Secondary structure (Cloverleaf model)
>WENV170696184	Asp	GTC
                   a      Gtta attgaaacgg
                     G - C
                     C - G
                     C - G
                     C - G
                     G + T
                     G - C
                     G - C          T A
                    T     A G C C C     A
      C G A        G      | | | | |     A
    G       T G T G       T C G G G     C
    G         | | +                 T T
    C       T C A T
      C T A        T     GGACTCGGGTTNNTCGGAC
                    G - C
                    A - T
                    G - C
                    C - G
                    C - G
                  C       A
                  T       G
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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