The detailed information of tRNA gene sequence


Sequence ID>WENV170696269
Genome IDLGVF01008868
Search identical group
Phylum/Class[LGVF] marine sediment metagenome; combined push core samples #3730, #5133, and #5579 collected at Hydrate Ridge
Species
Start position on genome 23969
End posion on genome 24054
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
agaccacttc
tRNA gene sequence 
GGAGGAATGGCCGAGTGGTTTAAGGCGGCGGTCTTGAAAACCGTTGTACGAAAGTACCGT
GGGTTCGAATCCTACTTCCTCCGCCA
Downstream region at tRNA end position 
ctcaatttta
Secondary structure (Cloverleaf model)
>WENV170696269	Ser	TGA
                   c      GCCA ctcaatttta
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     A - T
                     A - T          T A
                    T     C A T C C     A
      T G A        G      | | + | |     G
    G       G C C G       G T G G G     C
    G         | | |                 T T
    T       A G G C
      T T A        G     TGTACGAAAGTACC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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