The detailed information of tRNA gene sequence


Sequence ID>WENV170696297
Genome IDLGVF01010133
Search identical group
Phylum/Class[LGVF] marine sediment metagenome; combined push core samples #3730, #5133, and #5579 collected at Hydrate Ridge
Species
Start position on genome 250
End posion on genome 153
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
tgaatcctgc
tRNA gene sequence 
GGAAGTGCGCAGCTCACTGGTGGGGCTCCCGGACTTCAAATCCGGTGTGGGGCGCTAAAC
CCGTCCCGGGTGGGTTCGATTCCCATGCACTTCCGCCA
Downstream region at tRNA end position 
ttttttttcg
Secondary structure (Cloverleaf model)
>WENV170696297	SeC(p)	TCA
                   c      GCCA ttttttttcg
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     T - A
                     G - C
                     C - G          T T
                    G     T A C C C     A
      C A C        C      + | | | |     G
    T       T C G A       G T G G G     C
    G       + | | |                 T T
    G       G G C T
      T G G        C     TGTGGGGCGCTAAACCCGTCCCGG
                    C - G
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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