The detailed information of tRNA gene sequence


Sequence ID>WENV170696436
Genome IDLGVF01017242
Search identical group
Phylum/Class[LGVF] marine sediment metagenome; combined push core samples #3730, #5133, and #5579 collected at Hydrate Ridge
Species
Start position on genome 6744
End posion on genome 6669
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
ggcattttgc
tRNA gene sequence 
AGGCCAGTAGCTCTAACGGTAGAGCGTCGGACTCCAAATCCGGGTGTTGGGGGTTCGAAT
CCCTCCTGGCCTGCCA
Downstream region at tRNA end position 
aatcattctg
Secondary structure (Cloverleaf model)
>WENV170696436	Trp	CCA
                   c      GCCA aatcattctg
                     A - T
                     G - C
                     G - C
                     C - G
                     C - G
                     A - T
                     G - C          T A
                    T     C T C C C     A
      A A T        A      | + | | |     G
    C       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     GTGTT
                    T + G
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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