The detailed information of tRNA gene sequence


Sequence ID>WENV170696627
Genome IDLGVF01035624
Search identical group
Phylum/Class[LGVF] marine sediment metagenome; combined push core samples #3730, #5133, and #5579 collected at Hydrate Ridge
Species
Start position on genome 3250
End posion on genome 3326
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
acgctgaaat
tRNA gene sequence 
GTTTCGGTAGCTCAGCTGGATAGAGCAACGCCCTTCTAAGGCGTCGGCCGGGGGTTCGAA
TCCCTCCCGGAATGCCA
Downstream region at tRNA end position 
ttttaaagca
Secondary structure (Cloverleaf model)
>WENV170696627	Arg	TCT
                   t      GCCA ttttaaagca
                     G + T
                     T - A
                     T - A
                     T + G
                     C - G
                     G - C
                     G - C          T A
                    T     C T C C C     A
      C G A        A      | + | | |     G
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      A T A        A     CGGCC
                    A - T
                    C - G
                    G - C
                    C - G
                    C - G
                  C       A
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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