The detailed information of tRNA gene sequence


Sequence ID>WENV170696795
Genome IDLGVF01050077
Search identical group
Phylum/Class[LGVF] marine sediment metagenome; combined push core samples #3730, #5133, and #5579 collected at Hydrate Ridge
Species
Start position on genome 2599
End posion on genome 2523
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
aagtagtaat
tRNA gene sequence 
GGCGATGTAGCTCAGGTGGTTAGAGCATGCGGCTCATATCCGCAGTGTCCGGGGTTCGAG
TCCCTGCATCGCCACCA
Downstream region at tRNA end position 
gcaacaactt
Secondary structure (Cloverleaf model)
>WENV170696795	Met	CAT
                   t      ACCA gcaacaactt
                     G - C
                     G - C
                     C - G
                     G - C
                     A - T
                     T - A
                     G - C          T G
                    T     G T C C C     A
      G G A        A      | + | | |     G
    T       C T C G       C G G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GTGTC
                    T - A
                    G - C
                    C - G
                    G - C
                    G - C
                  C       T
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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