The detailed information of tRNA gene sequence


Sequence ID>WENV170697052
Genome IDLGVF01077116
Search identical group
Phylum/Class[LGVF] marine sediment metagenome; combined push core samples #3730, #5133, and #5579 collected at Hydrate Ridge
Species
Start position on genome 343
End posion on genome 417
Amino Acid Pro
Anticodon GGG
Upstream region at tRNA start position 
cccaccttaa
tRNA gene sequence 
GGGGCCGTAGGGTAGCCTGGACCATCCTGCAAGGCTGGGGGTCTTGTGACCGGAGTTCGA
ATCTCCGCGGCCCCAttt
Downstream region at tRNA end position 
actcaggcac
Secondary structure (Cloverleaf model)
>WENV170697052	Pro	GGG
                   a      Attt actcaggcac
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     G - C          T A
                    T     G C C T C     A
    C C G A        A      | | | | |     G
  T         T G G G       C G G A G     C
  G           | | +                 T T
  G         T C C T
    A C C A        G     TGAC
                    C - G
                    A - T
                    A - T
                    G - C
                    G + T
                  C       G
                  T       G
                    G G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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