The detailed information of tRNA gene sequence


Sequence ID>WENV170697057
Genome IDLGVF01077468
Search identical group
Phylum/Class[LGVF] marine sediment metagenome; combined push core samples #3730, #5133, and #5579 collected at Hydrate Ridge
Species
Start position on genome 1104
End posion on genome 1028
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
nnnnnnnnac
tRNA gene sequence 
GGACCGGTAGTTCAGCTGGTTAGAATGCCGGCCTGTCACGCCGGAGGTCGCGGGTTCAAA
TCCCGTCCGGTCCGCCA
Downstream region at tRNA end position 
tatttaagac
Secondary structure (Cloverleaf model)
>WENV170697057	Asp	GTC
                   c      GCCA tatttaagac
                     G - C
                     G - C
                     A - T
                     C - G
                     C - G
                     G - C
                     G - C          T A
                    T     T G C C C     A
      C G A        A      + | | | |     A
    T       C T T G       G C G G G     C
    G       | | | +                 T T
    G       G A A T
      T T A        G     AGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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