The detailed information of tRNA gene sequence


Sequence ID>WENV170697321
Genome IDLGVF01112680
Search identical group
Phylum/Class[LGVF] marine sediment metagenome; combined push core samples #3730, #5133, and #5579 collected at Hydrate Ridge
Species
Start position on genome 2280
End posion on genome 2183
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
agttatattc
tRNA gene sequence 
GGAAGTGGAAAGCTCACTGGTGGGGCTCCCGGACTTCAAATCCGGTGTGCCGGGCTAAAA
CCTCGGCAGGTGGGTTCGATTCCCATGCACTTCCGCCA
Downstream region at tRNA end position 
tttttatccc
Secondary structure (Cloverleaf model)
>WENV170697321	SeC(p)	TCA
                   c      GCCA tttttatccc
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     T - A
                     G - C
                     G   G          T T
                    A     T A C C C     A
      C A C        A      + | | | |     G
    T       T C G A       G T G G G     C
    G       + | | |                 T T
    G       G G C T
      T G G        C     TGTGCCGGGCTAAAACCTCGGCAG
                    C - G
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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