The detailed information of tRNA gene sequence


Sequence ID>WENV170697343
Genome IDLGVF01118606
Search identical group
Phylum/Class[LGVF] marine sediment metagenome; combined push core samples #3730, #5133, and #5579 collected at Hydrate Ridge
Species
Start position on genome 1062
End posion on genome 1138
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
caatttatgc
tRNA gene sequence 
AGGCCAGTAGCTCTAACGGTTAGAGCACCGGACTCCAAATCCGGGTGTTGGGGGTTCGAA
TCCCTCCTGGCCTGCCA
Downstream region at tRNA end position 
ttttttgcat
Secondary structure (Cloverleaf model)
>WENV170697343	Trp	CCA
                   c      GCCA ttttttgcat
                     A - T
                     G - C
                     G - C
                     C - G
                     C - G
                     A - T
                     G - C          T A
                    T     C T C C C     A
      A A T        A      | + | | |     G
    C       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GTGTT
                    C - G
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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