The detailed information of tRNA gene sequence


Sequence ID>WENV170697375
Genome IDLGVF01124172
Search identical group
Phylum/Class[LGVF] marine sediment metagenome; combined push core samples #3730, #5133, and #5579 collected at Hydrate Ridge
Species
Start position on genome 352
End posion on genome 427
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
aaaattatta
tRNA gene sequence 
AGGTCCGTAGCTCCAACGGCAGAGCACTGGACTCCAAATCCGGGGGTTGCAGGTTCAAAT
CCTGCCGGGCCTGCCA
Downstream region at tRNA end position 
tttttttatt
Secondary structure (Cloverleaf model)
>WENV170697375	Trp	CCA
                   a      GCCA tttttttatt
                     A - T
                     G - C
                     G - C
                     T + G
                     C - G
                     C - G
                     G - C          T A
                    T     C G T C C     A
      A A C        A      | | | | |     A
    C       C T C G       G C A G G     C
    G       | | | |                 T T
    G       G A G C
      C A          A     GGGTT
                    C - G
                    T + G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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