The detailed information of tRNA gene sequence


Sequence ID>WENV170697387
Genome IDLGVF01126230
Search identical group
Phylum/Class[LGVF] marine sediment metagenome; combined push core samples #3730, #5133, and #5579 collected at Hydrate Ridge
Species
Start position on genome 2465
End posion on genome 2390
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
ggatctcagc
tRNA gene sequence 
AGGCCAGTAGCTCTAATGGTAGAGCACCGGACTCCAAATCCGGGAGTTGGGGGTTCAAGT
CCCTCCTGGCCTGCCA
Downstream region at tRNA end position 
ttgtccgtta
Secondary structure (Cloverleaf model)
>WENV170697387	Trp	CCA
                   c      GCCA ttgtccgtta
                     A - T
                     G - C
                     G - C
                     C - G
                     C - G
                     A - T
                     G - C          T G
                    T     C T C C C     A
      A A T        A      | + | | |     A
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GAGTT
                    C - G
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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