The detailed information of tRNA gene sequence


Sequence ID>WENV170697490
Genome IDLGVF01144394
Search identical group
Phylum/Class[LGVF] marine sediment metagenome; combined push core samples #3730, #5133, and #5579 collected at Hydrate Ridge
Species
Start position on genome 187
End posion on genome 111
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position
gaatgaatgc
tRNA gene sequence
AGGCCAGTAGCTCTAACGGCTAGAGCACCGGACTCCAAATCCGGGTGTTGTGGGTTCGAA
TCCCTCCTGGCCTGCCA
Downstream region at tRNA end position
tttttattgt
Secondary structure (Cloverleaf model)
>WENV170697490	Trp	CCA
                   c      GCCA tttttattgt
                     A - T
                     G - C
                     G - C
                     C - G
                     C - G
                     A - T
                     G - C          T A
                    T     C T C C C     A
      A A T        A      |   | | |     G
    C       C T C G       G T G G G     C
    G       | | | |                 T T
    G       G A G C
      C T A        A     GTGTT
                    C - G
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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