The detailed information of tRNA gene sequence


Sequence ID>WENV170697511
Genome IDLGVF01148660
Search identical group
Phylum/Class[LGVF] marine sediment metagenome; combined push core samples #3730, #5133, and #5579 collected at Hydrate Ridge
Species
Start position on genome 5887
End posion on genome 5812
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
tttataattt
tRNA gene sequence 
AGGCCAGTAGCTCAATTGGCAGAGCAGCGGTCTCCAAAACCGCAGGTTGGGGGTTCGATT
CCCTCCTGGCCTGCCA
Downstream region at tRNA end position 
tacaaaaaag
Secondary structure (Cloverleaf model)
>WENV170697511	Trp	CCA
                   t      GCCA tacaaaaaag
                     A - T
                     G - C
                     G - C
                     C - G
                     C - G
                     A - T
                     G - C          T T
                    T     C T C C C     A
      T A A        A      | + | | |     G
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      C A          A     AGGTT
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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