The detailed information of tRNA gene sequence


Sequence ID>WENV170697566
Genome IDLGVF01154848
Search identical group
Phylum/Class[LGVF] marine sediment metagenome; combined push core samples #3730, #5133, and #5579 collected at Hydrate Ridge
Species
Start position on genome 1198
End posion on genome 1274
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
aaaaatatat
tRNA gene sequence 
GGGCTTTTAGCTCAGTTGGTCAGAGCATCCGGCTCATAACCGGCAGGTCCGGGGTTCGAA
TCCCTGAAGGCCCACCA
Downstream region at tRNA end position 
tatatttgcc
Secondary structure (Cloverleaf model)
>WENV170697566	Met	CAT
                   t      ACCA tatatttgcc
                     G - C
                     G - C
                     G - C
                     C - G
                     T + G
                     T - A
                     T - A          T A
                    T     G T C C C     A
      T G A        A      | + | | |     G
    T       C T C G       C G G G G     C
    G       | | | |                 T T
    G       G A G C
      T C A        A     AGGTC
                    T   C
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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