The detailed information of tRNA gene sequence


Sequence ID>WENV170697615
Genome IDLGVF01163183
Search identical group
Phylum/Class[LGVF] marine sediment metagenome; combined push core samples #3730, #5133, and #5579 collected at Hydrate Ridge
Species
Start position on genome 1150
End posion on genome 1076
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gctaaaaagg
tRNA gene sequence 
GGGCCTGTAGCTTAGTCAGGTTAGAGCGCCCGGCTCATAACCGGGCGGTCACCGGTTCAA
ATCCGGTCAGGCCCAtta
Downstream region at tRNA end position 
acttgcaata
Secondary structure (Cloverleaf model)
>WENV170697615	Met	CAT
                   g      Atta acttgcaata
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T - A
                     G - C          T A
                    T     T G G C C     A
    C T G A        A      | | | | |     A
  A         T T C G       A C C G G     C
  G         + | | |                 T T
  G         G A G C
    T T A          G     CGGTC
                    C - G
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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