The detailed information of tRNA gene sequence


Sequence ID>WENV170697709
Genome IDLGVF01179876
Search identical group
Phylum/Class[LGVF] marine sediment metagenome; combined push core samples #3730, #5133, and #5579 collected at Hydrate Ridge
Species
Start position on genome 234
End posion on genome 310
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position 
nnnnnnnnnn
tRNA gene sequence 
GCTGGTGTAGCTCAGCTGGCTAGAGCAGCTGATTTGTAATCAGCAGGTCGGGGGTTCGAG
TCCCTTCACCAGCTCCA
Downstream region at tRNA end position 
taaaattttt
Secondary structure (Cloverleaf model)
>WENV170697709	Thr	TGT
                   n      TCCA taaaattttt
                     G - C
                     C - G
                     T - A
                     G - C
                     G - C
                     T - A
                     G - C          T G
                    T     T T C C C     A
      C G A        A      + + | | |     G
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      C T A        A     AGGTC
                    G - C
                    C - G
                    T - A
                    G - C
                    A - T
                  T       A
                  T       A
                    T G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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