The detailed information of tRNA gene sequence


Sequence ID>WENV170697740
Genome IDLGVF01185767
Search identical group
Phylum/Class[LGVF] marine sediment metagenome; combined push core samples #3730, #5133, and #5579 collected at Hydrate Ridge
Species
Start position on genome 259
End posion on genome 162
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
agttatattc
tRNA gene sequence 
GGAAGTGGAAAGCTCACTGGTGGGGCTCCCGGACTTCAAATCCGGTGTGCCGGGCTAAAC
CCTCGGCAGGTGGGTTCGATTCCCATGCACTTCCGCCA
Downstream region at tRNA end position 
catgtaaatt
Secondary structure (Cloverleaf model)
>WENV170697740	SeC(p)	TCA
                   c      GCCA catgtaaatt
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     T - A
                     G - C
                     G   G          T T
                    A     T A C C C     A
      C A C        A      + | | | |     G
    T       T C G A       G T G G G     C
    G       + | | |                 T T
    G       G G C T
      T G G        C     TGTGCCGGGCTAAACCCTCGGCAG
                    C - G
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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