The detailed information of tRNA gene sequence


Sequence ID>WENV170698017
Genome IDLGVF01241001
Search identical group
Phylum/Class[LGVF] marine sediment metagenome; combined push core samples #3730, #5133, and #5579 collected at Hydrate Ridge
Species
Start position on genome 4315
End posion on genome 4240
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
gggtaaaatt
tRNA gene sequence 
AGGAGTGTAGCTCAATTGGTAGAGCACCGGTCTCCAAAACCGGGGGTTGCGGGTTCAATT
CCTGCCACTCCTGCTA
Downstream region at tRNA end position 
atatcgcatt
Secondary structure (Cloverleaf model)
>WENV170698017	Trp	CCA
                   t      GCTA atatcgcatt
                     A - T
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A
                     G - C          T T
                    T     C G T C C     A
      T A A        A      | | + | |     A
    T       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GGGTT
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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