The detailed information of tRNA gene sequence


Sequence ID>WENV170698222
Genome IDLGVF01288964
Search identical group
Phylum/Class[LGVF] marine sediment metagenome; combined push core samples #3730, #5133, and #5579 collected at Hydrate Ridge
Species
Start position on genome 80
End posion on genome 169
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
aataaaacct
tRNA gene sequence 
GGAGGGGTCGCATAGTCCGGCCTAGTGCGCGCGCTTGGAGAGCGCGTATTCCTCACGGAA
TCGTGGGTTCGAATCCCACCCCCTCCGCCT
Downstream region at tRNA end position 
tcaaatcgcc
Secondary structure (Cloverleaf model)
>WENV170698222	Ser	GGA
                   t      GCCT tcaaatcgcc
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C A C C C     A
    C T G A        C      | | | | |     G
  C         T A C G       G T G G G     C
  G         + | | |                 T T
  G         G T G C
    C C T A        G     TATTCCTCACGGAATC
                    C - G
                    G - C
                    C - G
                    G - C
                    C - G
                  T       A
                  T       G
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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