The detailed information of tRNA gene sequence


Sequence ID>WENV170698240
Genome IDLGVF01293926
Search identical group
Phylum/Class[LGVF] marine sediment metagenome; combined push core samples #3730, #5133, and #5579 collected at Hydrate Ridge
Species
Start position on genome 2282
End posion on genome 2210
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
nnnnnnnnnn
tRNA gene sequence 
GCCAAGGTGGCGGAGAGGCACACGCGGCTGACTGCAGATCAGCTATACCCCGGTTCAAAT
CCGGGCCTTGGCTtcc
Downstream region at tRNA end position 
ttggcattaa
Secondary structure (Cloverleaf model)
>WENV170698240	Cys	GCA
                   n      Ttcc ttggcattaa
                     G - C
                     C - G
                     C - G
                     A - T
                     A - T
                     G - C
                     G - C          T A
                    T     G G G C C     A
      A G A        G      | | | | |     A
    G       G G C G       C C C G G     C
    G         | | |                 T T
    C       A C G C
      A C          G     TATAC
                    G - C
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       G
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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