The detailed information of tRNA gene sequence


Sequence ID>WENV170698367
Genome IDLGVF01321194
Search identical group
Phylum/Class[LGVF] marine sediment metagenome; combined push core samples #3730, #5133, and #5579 collected at Hydrate Ridge
Species
Start position on genome 503
End posion on genome 579
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
aagattttgc
tRNA gene sequence 
AGGCCAGTAGCTCTAATGGCTAGAGCACCGGACTCCAAATCCGGGTGTTGGGGGTTCGAA
TCCCTCCTGGCCTGCCA
Downstream region at tRNA end position 
gcaaatatca
Secondary structure (Cloverleaf model)
>WENV170698367	Trp	CCA
                   c      GCCA gcaaatatca
                     A - T
                     G - C
                     G - C
                     C - G
                     C - G
                     A - T
                     G - C          T A
                    T     C T C C C     A
      A A T        A      | + | | |     G
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      C T A        A     GTGTT
                    C - G
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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