The detailed information of tRNA gene sequence


Sequence ID>WENV170698508
Genome IDLGVF01350532
Search identical group
Phylum/Class[LGVF] marine sediment metagenome; combined push core samples #3730, #5133, and #5579 collected at Hydrate Ridge
Species
Start position on genome 692
End posion on genome 768
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
ttttgtatgc
tRNA gene sequence 
AGGCCAGTAGCTCTAATGGCTAGAGCACCGGTCTCCAAAACCGGGTGTTGGGGGTTCGAG
TCCCTCCTGGCCTGCCA
Downstream region at tRNA end position 
ctttttatgg
Secondary structure (Cloverleaf model)
>WENV170698508	Trp	CCA
                   c      GCCA ctttttatgg
                     A - T
                     G - C
                     G - C
                     C - G
                     C - G
                     A - T
                     G - C          T G
                    T     C T C C C     A
      A A T        A      | + | | |     G
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      C T A        A     GTGTT
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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