The detailed information of tRNA gene sequence


Sequence ID>WENV170698677
Genome IDLGVF01390546
Search identical group
Phylum/Class[LGVF] marine sediment metagenome; combined push core samples #3730, #5133, and #5579 collected at Hydrate Ridge
Species
Start position on genome 919
End posion on genome 829
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
atatagaagt
tRNA gene sequence 
GGAGAGGTGACCGAGTTGGTTGAAGGTGTGCGCCTGCTAAGCGTATGTAGGGGAAACCTT
ACCGAGGGTTCGAATCCCTCCCTCTCCGCCA
Downstream region at tRNA end position 
gttcttaatt
Secondary structure (Cloverleaf model)
>WENV170698677	Ser	GCT
                   t      GCCA gttcttaatt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
    T T G A        G      | | | | |     G
  G         G C C A       G A G G G     C
  G           | | |                 T T
  T         A G G T
    T G A          G     TGTAGGGGAAACCTTACC
                    T - A
                    G + T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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