The detailed information of tRNA gene sequence


Sequence ID>WENV170698791
Genome IDLGVF01417825
Search identical group
Phylum/Class[LGVF] marine sediment metagenome; combined push core samples #3730, #5133, and #5579 collected at Hydrate Ridge
Species
Start position on genome 1109
End posion on genome 1185
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
gtctcaaagt
tRNA gene sequence 
CGGGACGTGGCTCAGCCTGGTAGAGCACAGCGTTCGGGACGCTGGGGTCGCTGGTTCAAA
TCCAGTCGTCCCGACCA
Downstream region at tRNA end position 
tttnnnnnnn
Secondary structure (Cloverleaf model)
>WENV170698791	Pro	CGG
                   t      ACCA tttnnnnnnn
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T
                     C - G
                     G - C          T A
                    T     T G A C C     A
      C G A        G      + | | | |     A
    C       C T C G       G C T G G     C
    T       | | | |                 T T
    G       G A G C
      G T A        A     GGGTC
                    C - G
                    A - T
                    G - C
                    C - G
                    G - C
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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