The detailed information of tRNA gene sequence


Sequence ID>WENV170698822
Genome IDLGVF01422945
Search identical group
Phylum/Class[LGVF] marine sediment metagenome; combined push core samples #3730, #5133, and #5579 collected at Hydrate Ridge
Species
Start position on genome 1219
End posion on genome 1144
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
ccgcaaccat
tRNA gene sequence 
GGTCCCGTGGTGTAGCGGTTAACATGCCTGACTGTCACTCAGGAGATCGCGAGTTCGATT
CTCGTCGGGACCGCCA
Downstream region at tRNA end position 
tttatggctc
Secondary structure (Cloverleaf model)
>WENV170698822	Asp	GTC
                   t      GCCA tttatggctc
                     G - C
                     G - C
                     T - A
                     C - G
                     C - G
                     C - G
                     G - C          T T
                    T     T G C T C     A
      C G A        G      + | | | |     G
    G       T G T G       G C G A G     C
    G       | | | +                 T T
    T       A C A T
      T A          G     AGATC
                    C - G
                    C - G
                    T - A
                    G - C
                    A - T
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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