The detailed information of tRNA gene sequence


Sequence ID>WENV170698881
Genome IDLGVF01438285
Search identical group
Phylum/Class[LGVF] marine sediment metagenome; combined push core samples #3730, #5133, and #5579 collected at Hydrate Ridge
Species
Start position on genome 2146
End posion on genome 2070
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ttagtttttg
tRNA gene sequence 
GGGCCTTTAGCTCAGTTGGTTAGAGCAACCGGCTCATAACCGGTAGGTCCGGGGTTCGAG
CCCCTGAAGGCCCACCA
Downstream region at tRNA end position 
tatttttttt
Secondary structure (Cloverleaf model)
>WENV170698881	Met	CAT
                   g      ACCA tatttttttt
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T - A
                     T - A          C G
                    T     G T C C C     A
      T G A        A      | + | | |     G
    T       C T C G       C G G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     AGGTC
                    A - T
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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