The detailed information of tRNA gene sequence


Sequence ID>WENV170698946
Genome IDLGVF01445576
Search identical group
Phylum/Class[LGVF] marine sediment metagenome; combined push core samples #3730, #5133, and #5579 collected at Hydrate Ridge
Species
Start position on genome 6498
End posion on genome 6574
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
gtttttttgc
tRNA gene sequence 
GGGGCTGTAGTAGAGTCGGTTACAACATCGGCCTGTCACGCCGGAGGTCGCGGGTTCGAG
TCCCGTCAGCCCCGCCA
Downstream region at tRNA end position 
tttagtttcg
Secondary structure (Cloverleaf model)
>WENV170698946	Asp	GTC
                   c      GCCA tttagtttcg
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     T - A
                     G - C          T G
                    T     T G C C C     A
      T G A        A      + | | | |     G
    C       G A T G       G C G G G     C
    G       |   | |                 T T
    G       C A A C
      T T A        A     AGGTC
                    T + G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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