The detailed information of tRNA gene sequence


Sequence ID>WENV170699102
Genome IDLGVF01481540
Search identical group
Phylum/Class[LGVF] marine sediment metagenome; combined push core samples #3730, #5133, and #5579 collected at Hydrate Ridge
Species
Start position on genome 588
End posion on genome 513
Amino Acid Thr
Anticodon CGT
Upstream region at tRNA start position 
gaataataat
tRNA gene sequence 
GCTGGGATGGCACAGATGGTAGCGCAACTGATTCGTAATCAGTAGGTCGGGGGTTCGAAT
CCCCCTTCCAGCACCA
Downstream region at tRNA end position 
ttatttttta
Secondary structure (Cloverleaf model)
>WENV170699102	Thr	CGT
                   t      ACCA ttatttttta
                     G - C
                     C - G
                     T - A
                     G - C
                     G - C
                     G + T
                     A - T          T A
                    T     C C C C C     A
      A G A        G      | | | | |     G
    T       C A C G       G G G G G     C
    G       |   | |                 T T
    G       G C G C
      T A          A     AGGTC
                    A - T
                    C - G
                    T - A
                    G - C
                    A - T
                  T       A
                  T       A
                    C G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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