The detailed information of tRNA gene sequence


Sequence ID>WENV170699116
Genome IDLGVF01484042
Search identical group
Phylum/Class[LGVF] marine sediment metagenome; combined push core samples #3730, #5133, and #5579 collected at Hydrate Ridge
Species
Start position on genome 219
End posion on genome 145
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gattcatttc
tRNA gene sequence 
GGGCCTATAGCTCAGTTGGTTAGAGCACCTGACTCATAATCAGGTGGTCCCTGGTTCAAG
CCCAGGTGGGCCCACtc
Downstream region at tRNA end position 
tataaaccaa
Secondary structure (Cloverleaf model)
>WENV170699116	Met	CAT
                   c      ACtc tataaaccaa
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T + G
                     A - T          C G
                    T     G G A C C     A
      T G A        A      | | | | |     A
    T       C T C G       C C T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     TGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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