The detailed information of tRNA gene sequence


Sequence ID>WENV170699339
Genome IDLGVF01529116
Search identical group
Phylum/Class[LGVF] marine sediment metagenome; combined push core samples #3730, #5133, and #5579 collected at Hydrate Ridge
Species
Start position on genome 114
End posion on genome 39
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
cttttaccgt
tRNA gene sequence 
GGGGCTGTAGCTCAGCTGGGAGAGCGTACGGCTGGCAGCCGTAAGGTCAGGGGTTCGATC
CCCCTCAGCTCCACCA
Downstream region at tRNA end position 
tttctttttt
Secondary structure (Cloverleaf model)
>WENV170699339	Ala	GGC
                   t      ACCA tttctttttt
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     T - A
                     G - C          C T
                    T     T C C C C     A
      C G A        A      | | | | |     G
    T       C T C G       A G G G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    T - A
                    A - T
                    C - G
                    G - C
                    G - C
                  C       G
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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