The detailed information of tRNA gene sequence


Sequence ID>WENV170699593
Genome IDLGVF01592911
Search identical group
Phylum/Class[LGVF] marine sediment metagenome; combined push core samples #3730, #5133, and #5579 collected at Hydrate Ridge
Species
Start position on genome 212
End posion on genome 288
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
tataaaacgc
tRNA gene sequence 
AGGCCAGTAGTTCCAACGGCTAGAACGCCGGTCTCCAAAACCGGATGCTGGGGGTTCGAA
TCCCTCCTGGCCTGCCA
Downstream region at tRNA end position 
cttcatttta
Secondary structure (Cloverleaf model)
>WENV170699593	Trp	CCA
                   c      GCCA cttcatttta
                     A - T
                     G - C
                     G - C
                     C - G
                     C - G
                     A - T
                     G - C          T A
                    T     C T C C C     A
      A A C        A      | + | | |     G
    C       C T T G       G G G G G     C
    G       | | | |                 T T
    G       G A A C
      C T A        G     ATGCT
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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