The detailed information of tRNA gene sequence


Sequence ID>WENV170699723
Genome IDLGVF01636666
Search identical group
Phylum/Class[LGVF] marine sediment metagenome; combined push core samples #3730, #5133, and #5579 collected at Hydrate Ridge
Species
Start position on genome 155
End posion on genome 242
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
tttttattgt
tRNA gene sequence 
CGGGAGATGGCAGAGCGGTTGAATGCACTGGTCTTGAAAACCAGCGAGGGTCATACCTCC
GGGAGTTCGAATCTCCCTCTCCCGGCCA
Downstream region at tRNA end position 
tttatttttt
Secondary structure (Cloverleaf model)
>WENV170699723	Ser	TGA
                   t      GCCA tttatttttt
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C C C T C     A
      C G A        G      | | | | |     G
    G       G A C G       G G G A G     C
    G         | | |                 T T
    T       A T G C
      T G A        A     CGAGGGTCATACCTCC
                    C - G
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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