The detailed information of tRNA gene sequence


Sequence ID>WENV170699913
Genome IDLGVF01680268
Search identical group
Phylum/Class[LGVF] marine sediment metagenome; combined push core samples #3730, #5133, and #5579 collected at Hydrate Ridge
Species
Start position on genome 278
End posion on genome 202
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
aaatttatgc
tRNA gene sequence 
GGCCTGGTAGTTCAGTTGGTTAGAATGCCAGCCTGTCACGCTGGAGGTCGAGAGTTCGAG
TCTCTTCCAGGTCGCCA
Downstream region at tRNA end position 
tttcatttaa
Secondary structure (Cloverleaf model)
>WENV170699913	Asp	GTC
                   c      GCCA tttcatttaa
                     G - C
                     G + T
                     C - G
                     C - G
                     T - A
                     G - C
                     G - C          T G
                    T     T T C T C     A
      T G A        A      + | | | |     G
    T       C T T G       G A G A G     C
    G       | | | +                 T T
    G       G A A T
      T T A        G     AGGTC
                    C - G
                    C - G
                    A - T
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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