The detailed information of tRNA gene sequence


Sequence ID>WENV170700163
Genome IDLIDZ01004864
Search identical group
Phylum/Class[LIDZ] food metagenome; wine grapes on drying loft during traditional withering process
Species
Start position on genome 2626
End posion on genome 2530
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
atcttgtttc
tRNA gene sequence 
GGGAGTGGATGGGTTCTGGTGGGCCCTCTGGTCTTCAAAACCAGTATGAGGAGTTAGTAG
CTTCTTGGGTGGGTTCGATTCCCACACATTCCCGCCA
Downstream region at tRNA end position 
attatgccta
Secondary structure (Cloverleaf model)
>WENV170700163	SeC(p)	TCA
                   c      GCCA attatgccta
                     G - C
                     G - C
                     G - C
                     A - T
                     G + T
                     T - A
                     G - C
                     G   A          T T
                    A     C A C C C     A
      T C T        T      | | | | |     G
    G       T G G G       G T G G G     C
    G       + | | |                 T T
    T       G C C C
      G G          T     TATGAGGAGTTAGTAGCTTCTTGG
                    C - G
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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