The detailed information of tRNA gene sequence


Sequence ID>WENV170701014
Genome IDLKGT01001005
Search identical group
Phylum/Class[LKGT] marine sediment metagenome; sediment sample collected at the water-sediment interface from the South Pacific gyre, IODP
Species
Start position on genome 1772
End posion on genome 1698
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tgttgttcga
tRNA gene sequence 
GGGCCCGTAACTCAGCTTGGTAGAGTAACCGGCTCATAACCGGTGAGCCAAGGGATCGAA
GCCCTTCGGGCCCACtt
Downstream region at tRNA end position 
tttactccta
Secondary structure (Cloverleaf model)
>WENV170701014	Met	CAT
                   a      ACtt tttactccta
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          G A
                    T     T T C C C     A
      C G A        A      | | | | |     G
    T       C T C A       A A G G G     C
    T       | | | |                 A T
    G       G A G T
      G T A        A     GAGCC
                    A - T
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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