The detailed information of tRNA gene sequence


Sequence ID>WENV170701074
Genome IDLKGT01002158
Search identical group
Phylum/Class[LKGT] marine sediment metagenome; sediment sample collected at the water-sediment interface from the South Pacific gyre, IODP
Species
Start position on genome 2270
End posion on genome 2196
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
ncatnnangn
tRNA gene sequence 
GGGCTGATAGTTCAGACTGGTAGAATACTCGCCTTGCACGCGAGGGGTCAGGGGTTCAAA
TCCCCTTCAGTCCACtt
Downstream region at tRNA end position 
tttaaattaa
Secondary structure (Cloverleaf model)
>WENV170701074	Ala	TGC
                   n      ACtt tttaaattaa
                     G - C
                     G - C
                     G + T
                     C - G
                     T - A
                     G - C
                     A - T          T A
                    T     T C C C C     A
      A G A        A      | | | | |     A
    C       C T T G       A G G G G     C
    T       | | | +                 T T
    G       G A A T
      G T A        A     GGGTC
                    C - G
                    T - A
                    C - G
                    G - C
                    C - G
                  C       C
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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