The detailed information of tRNA gene sequence


Sequence ID>WENV170701079
Genome IDLKGT01002271
Search identical group
Phylum/Class[LKGT] marine sediment metagenome; sediment sample collected at the water-sediment interface from the South Pacific gyre, IODP
Species
Start position on genome 3991
End posion on genome 4067
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
ttttcttcrm
tRNA gene sequence 
GCTCCTGTGGTGTAGTCCGGCTAAGCATACTGCCCTCTCAAGGCAGTGATCTCGGGTTCA
AATCCCGACGGGAGCACgc
Downstream region at tRNA end position 
ctgtttttaa
Secondary structure (Cloverleaf model)
>WENV170701079	Glu	CTC
                   m      ACgc ctgtttttaa
                     G - C
                     C - G
                     T - A
                     C - G
                     C - G
                     T + G
                     G - C          T A
                    T     A G C C C     A
    C T G A        G      | | | | |     A
  C         T G T G       T C G G G     C
  G         + | | +                 T T
  G         G C A T
    C T A A        A     TGATC
                    C - G
                    T - A
                    G - C
                    C - G
                    C - G
                  C       A
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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