The detailed information of tRNA gene sequence


Sequence ID>WENV170701094
Genome IDLKGT01002452
Search identical group
Phylum/Class[LKGT] marine sediment metagenome; sediment sample collected at the water-sediment interface from the South Pacific gyre, IODP
Species
Start position on genome 447
End posion on genome 372
Amino Acid Ala
Anticodon CGC
Upstream region at tRNA start position 
cgaaatnncc
tRNA gene sequence 
GGGGCCGTAGCTCAGTTGGGAGAGCGCGACGTTCGCAATGTCGAGGTCAGGGGTTCGATT
CCCCTCGGCTCCACCA
Downstream region at tRNA end position 
ttnnnnnnna
Secondary structure (Cloverleaf model)
>WENV170701094	Ala	CGC
                   c      ACCA ttnnnnnnna
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     C - G
                     G - C          T T
                    T     T C C C C     A
      T G A        A      | | | | |     G
    T       C T C G       A G G G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    C - G
                    G - C
                    A - T
                    C - G
                    G + T
                  T       A
                  T       A
                    C G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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