The detailed information of tRNA gene sequence


Sequence ID>WENV170701180
Genome IDLKGT01004258
Search identical group
Phylum/Class[LKGT] marine sediment metagenome; sediment sample collected at the water-sediment interface from the South Pacific gyre, IODP
Species
Start position on genome 2130
End posion on genome 2053
Amino Acid Pro
Anticodon GGG
Upstream region at tRNA start position 
tgaaaaataa
tRNA gene sequence 
GGGGCCGTCGTCTAGATTGGCTATGATGCCAGCCTGGGGTGCTGGAGGTCGCAGGTTCAA
ATCCTGCCGGTCCCACCA
Downstream region at tRNA end position 
tcatattaaa
Secondary structure (Cloverleaf model)
>WENV170701180	Pro	GGG
                   a      ACCA tcatattaaa
                     G - C
                     G - C
                     G - C
                     G + T
                     C - G
                     C - G
                     G - C          T A
                    T     C G T C C     A
    T A G A        C      | | | | |     A
  T         T C T G       G C A G G     C
  G           | | +                 T T
  G         T G A T
    C T A          G     AGGTC
                    C - G
                    C - G
                    A - T
                    G - C
                    C - G
                  C       T
                  T       G
                    G G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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