The detailed information of tRNA gene sequence


Sequence ID>WENV170701325
Genome IDLKGT01006815
Search identical group
Phylum/Class[LKGT] marine sediment metagenome; sediment sample collected at the water-sediment interface from the South Pacific gyre, IODP
Species
Start position on genome 9560
End posion on genome 9636
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ttttttcgtg
tRNA gene sequence 
GGGCCCGTAACTCAGCTTGGTAGAGTAACCGGCTCATAACCGGTGAGCCAAGGGATCGAA
GCCCTTCGGGCCCACCA
Downstream region at tRNA end position 
aattcaatta
Secondary structure (Cloverleaf model)
>WENV170701325	Met	CAT
                   g      ACCA aattcaatta
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          G A
                    T     T T C C C     A
      C G A        A      | | | | |     G
    T       C T C A       A A G G G     C
    T       | | | |                 A T
    G       G A G T
      G T A        A     GAGCC
                    A - T
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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